Update documentation structure and enhance .gitignore

- Added generated index files and report directories to .gitignore to prevent unnecessary tracking of transient files.
- Updated README links to reflect new documentation paths for better navigation.
- Improved documentation organization by ensuring all links point to the correct locations, enhancing user experience and accessibility.
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# Guest Agent Documentation
This directory contains documentation related to Proxmox guest agent implementation and configuration.
## Contents
- **[Guest Agent Checklist](GUEST_AGENT_CHECKLIST.md)** - Checklist for guest agent setup
- **[Guest Agent Configuration Analysis](GUEST_AGENT_CONFIGURATION_ANALYSIS.md)** - Analysis of guest agent configuration
**Related Guides**:
- [Quick Install Guest Agent](../guides/QUICK_INSTALL_GUEST_AGENT.md) - Quick installation guide
- [Enable Guest Agent Manual](../guides/enable-guest-agent-manual.md) - Manual steps
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**Last Updated**: 2025-01-09